MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Streptococcus sp.
19428wD3_AN2
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 102
bases: 2,333,308 bps
CDS: 1,981
rRNA: 5
Repeat region:
tmRNA: 1
tRNA: 45
misc RNA:
Total features: 2,032
Total number of protein coding genes annotated/found:
1,981
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Items 21 - 40
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5029|JADGKY010000010.1
SEQF5029_00021
Genome Viewer
NA
AA
879/293
25678-26556
putative ABC transporter extracellular-binding protein YckB
SEQF5029|JADGKY010000010.1
SEQF5029_00022
Genome Viewer
NA
AA
666/222
26652-27317
L-cystine transport system permease protein YecS
SEQF5029|JADGKY010000010.1
SEQF5029_00023
Genome Viewer
NA
AA
456/152
27908-27453
Peroxide-responsive repressor PerR
SEQF5029|JADGKY010000010.1
SEQF5029_00024
Genome Viewer
NA
AA
750/250
28055-28804
tRNA pseudouridine synthase A
SEQF5029|JADGKY010000010.1
SEQF5029_00025
Genome Viewer
NA
AA
762/254
28794-29555
Pyridoxine kinase
SEQF5029|JADGKY010000010.1
SEQF5029_00026
Genome Viewer
NA
AA
519/173
29503-30021
Thiamine precursor transporter HmpT
SEQF5029|JADGKY010000010.1
SEQF5029_00027
Genome Viewer
NA
AA
525/175
30060-30584
hypothetical protein
SEQF5029|JADGKY010000010.1
SEQF5029_00028
Genome Viewer
NA
AA
1284/428
30702-31985
Trigger factor
SEQF5029|JADGKY010000010.1
SEQF5029_00029
Genome Viewer
NA
AA
594/198
32188-32781
putative DNA-directed RNA polymerase subunit delta
SEQF5029|JADGKY010000010.1
SEQF5029_00030
Genome Viewer
NA
AA
1605/535
32895-34499
CTP synthase
SEQF5029|JADGKY010000010.1
SEQF5029_00032
Genome Viewer
NA
AA
882/294
34880-35761
Fructose-bisphosphate aldolase
SEQF5029|JADGKY010000010.1
SEQF5029_00033
Genome Viewer
NA
AA
189/63
35997-36185
50S ribosomal protein L28
SEQF5029|JADGKY010000010.1
SEQF5029_00034
Genome Viewer
NA
AA
366/122
36726-37091
putative protein
SEQF5029|JADGKY010000010.1
SEQF5029_00035
Genome Viewer
NA
AA
1668/556
37091-38758
putative protein
SEQF5029|JADGKY010000010.1
SEQF5029_00036
Genome Viewer
NA
AA
993/331
38881-39873
Ribose operon repressor
SEQF5029|JADGKY010000010.1
SEQF5029_00037
Genome Viewer
NA
AA
1299/433
40036-41334
Diacetylchitobiose binding protein DasA
SEQF5029|JADGKY010000010.1
SEQF5029_00038
Genome Viewer
NA
AA
885/295
41413-42297
sn-glycerol-3-phosphate transport system permease protein UgpA
SEQF5029|JADGKY010000010.1
SEQF5029_00039
Genome Viewer
NA
AA
843/281
42290-43132
L-arabinose transport system permease protein AraQ
SEQF5029|JADGKY010000010.1
SEQF5029_00040
Genome Viewer
NA
AA
1365/455
43138-44502
Sucrose-6-phosphate hydrolase
SEQF5029|JADGKY010000010.1
SEQF5029_00041
Genome Viewer
NA
AA
291/97
44659-44949
30S ribosomal protein S6
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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